reactome.db

This package is for version 3.9 of Bioconductor; for the stable, up-to-date release version, see reactome.db.

A set of annotation maps for reactome


Bioconductor version: 3.9

A set of annotation maps for reactome assembled using data from reactome

Author: Willem Ligtenberg

Maintainer: Willem Ligtenberg <willem at wligtenberg.nl>

Citation (from within R, enter citation("reactome.db")):

Installation

To install this package, start R (version "3.6") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("reactome.db")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text

Details

biocViews AnnotationData, FunctionalAnnotation
Version 1.68.0
License CC BY 4.0
Depends R (>= 2.7.0), methods, AnnotationDbi(>= 1.33.0)
Imports methods, AnnotationDbi
System Requirements
URL
See More
Suggests RSQLite
Linking To
Enhances
Depends On Me
Imports Me attract, bioCancer, mAPKL, methylGSA, ReactomePA, scTensor, SMITE
Suggests Me AnnotationDbi, BioCor, ChIPpeakAnno, FGNet, fgsea, gCMAP, GeneAnswers, MLP, PCAN, safe
Links To Me

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package reactome.db_1.68.0.tar.gz
Windows Binary
Mac OS X 10.11 (El Capitan)
Package Short Url https://bioconductor.org/packages/reactome.db/
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