Last updated on 2024-06-08 09:49:43 CEST.
| Package | ERROR | OK |
|---|---|---|
| admiralonco | 3 | 10 |
Current CRAN status: ERROR: 3, OK: 10
Version: 1.0.0
Check: examples
Result: ERROR
Running examples in ‘admiralonco-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: rsp_y
> ### Title: Pre-Defined Response Event Objects
> ### Aliases: rsp_y no_data_n cb_y bor_cr bor_pr bor_sd bor_non_crpd bor_pd
> ### bor_ne no_data_missing crsp_y_cr crsp_y_pr cbor_cr cbor_pr
> ### Keywords: source_specifications
>
> ### ** Examples
>
> # This shows the definition of all pre-defined `event` objects that ship
> # with {admiralonco}
> exports <- sort(getNamespaceExports("admiralonco"))
> for (obj_name in exports) {
+ obj <- getExportedValue("admiralonco", obj_name)
+ if (inherits(obj, "event_def")) {
+ cat("\n", obj_name, ":\n", sep = "")
+ print(obj, indent = 2)
+ }
+ }
bor_cr:
<event> object
description: "Define complete response (CR) for best overall response (BOR)"
dataset_name: "ovr"
condition: AVALC == "CR"
mode: NULL
order: NULL
set_values_to:
Error in is_named(list[[name]]) : could not find function "is_named"
Calls: print -> print.source -> print_named_list
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
derive_param_confirmed_bor 6.641 0.048 9.810
derive_param_confirmed_resp 6.321 0.051 8.719
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘admiralonco.Rmd’ using rmarkdown
--- finished re-building ‘admiralonco.Rmd’
--- re-building ‘adrs.Rmd’ using rmarkdown
Quitting from lines 233-256 [unnamed-chunk-11] (adrs.Rmd)
Error: processing vignette 'adrs.Rmd' failed with diagnostics:
could not find function "is_named"
--- failed re-building ‘adrs.Rmd’
--- re-building ‘adrs_basic.Rmd’ using rmarkdown
Quitting from lines 232-255 [unnamed-chunk-11] (adrs_basic.Rmd)
Error: processing vignette 'adrs_basic.Rmd' failed with diagnostics:
could not find function "is_named"
--- failed re-building ‘adrs_basic.Rmd’
--- re-building ‘adtr.Rmd’ using rmarkdown
Quitting from lines 355-369 [unnamed-chunk-16] (adtr.Rmd)
Error: processing vignette 'adtr.Rmd' failed with diagnostics:
could not find function "is_named"
--- failed re-building ‘adtr.Rmd’
--- re-building ‘adtte.Rmd’ using rmarkdown
--- finished re-building ‘adtte.Rmd’
--- re-building ‘irecist.Rmd’ using rmarkdown
Quitting from lines 243-254 [unnamed-chunk-11] (irecist.Rmd)
Error: processing vignette 'irecist.Rmd' failed with diagnostics:
could not find function "is_named"
--- failed re-building ‘irecist.Rmd’
--- re-building ‘nactdt.Rmd’ using rmarkdown
--- finished re-building ‘nactdt.Rmd’
SUMMARY: processing the following files failed:
‘adrs.Rmd’ ‘adrs_basic.Rmd’ ‘adtr.Rmd’ ‘irecist.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.0.0
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘admiralonco.Rmd’ using rmarkdown
--- finished re-building ‘admiralonco.Rmd’
--- re-building ‘adrs.Rmd’ using rmarkdown
--- finished re-building ‘adrs.Rmd’
--- re-building ‘adrs_basic.Rmd’ using rmarkdown
--- finished re-building ‘adrs_basic.Rmd’
--- re-building ‘adtr.Rmd’ using rmarkdown
--- finished re-building ‘adtr.Rmd’
--- re-building ‘adtte.Rmd’ using rmarkdown
--- finished re-building ‘adtte.Rmd’
--- re-building ‘irecist.Rmd’ using rmarkdown
Quitting from lines 547-568 [unnamed-chunk-24] (irecist.Rmd)
Error: processing vignette 'irecist.Rmd' failed with diagnostics:
Argument `cnd_type` must be equal to one of "message", "warning", or
"error".
--- failed re-building ‘irecist.Rmd’
--- re-building ‘nactdt.Rmd’ using rmarkdown
--- finished re-building ‘nactdt.Rmd’
SUMMARY: processing the following file failed:
‘irecist.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc